Pairwise Alignments

Query, 297 a.a., Vitamin B12 ABC transporter, substrate-binding protein BtuF from Variovorax sp. SCN45

Subject, 274 a.a., periplasmic binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 7/267 (2%)

Query: 30  ALGRRVRIAAPPQRIVVVFPSNVELAWALGLEDRVAAIGGRVRWPESARAKPSIGGSLGY 89
           AL   V +A P +RI+ + P  VE+ +A+G  + + A      +PE+A+  PSIGG  G 
Sbjct: 14  ALLPAVAMAEPAKRIIALSPHAVEMLYAIGAGESIVAATDYADYPEAAKKIPSIGGYYGI 73

Query: 90  SAEAVAAYRPDLVVVTPSHYSALGLVEAFERVQVPSVVLAHPDLPSVFRNIELLGRATGT 149
             E V    PDL+VV  +   A   +   + +       +   L  V + IE LG  TG 
Sbjct: 74  QIERVLELNPDLIVVWDTGNKAED-INQLKNLGFKLYSSSPKTLEDVAKEIEELGELTGH 132

Query: 150 EEAARQLRAGMEARLQAVSQALDGAPRRSVYLETAAAARGAFQTMGTGHYANDALQWAGG 209
            E A ++ A   + L  +           V+ +  +       T+    +    +    G
Sbjct: 133 TEQASRVAADYRSELLRLRSENAAKSEPKVFYQLWST---PLMTVAKNSWIQQIIGVCHG 189

Query: 210 RNVFADLQGS-QQVSAEAIFVRDPDVIISLQQVPKDPALIAERPGWHSLRAVKNGRVVVL 268
           +NVF D      QVS E + +  P+VI  LQ   +      +   W  + AVKN  +  L
Sbjct: 190 KNVFYDAASDYPQVSLENVLLTLPEVI--LQSEEEGNVKGVDWSQWAEIPAVKNQHIYQL 247

Query: 269 ERSHKLIPGPRQIEAVEQYARALHPER 295
                    PR +  V+    AL   R
Sbjct: 248 NADLLHRATPRALLGVKAVCDALDKAR 274