Pairwise Alignments

Query, 283 a.a., Uracil-DNA glycosylase, family 1 from Variovorax sp. SCN45

Subject, 245 a.a., uracil-DNA glycosylase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 62.4 bits (150), Expect = 9e-15
 Identities = 71/238 (29%), Positives = 97/238 (40%), Gaps = 34/238 (14%)

Query: 54  RKGRRLPGMPAGAHMLKAFDSVMPSKVRCLVLGQDPYPSIDIATGRAFEV-GNVAQWREL 112
           RKGR +   P    +  A  +    +VR +VLGQDPY     A G AF V   V   R L
Sbjct: 34  RKGRVV--YPPSGQVFAALRATPWDRVRVVVLGQDPYHGEGQAHGLAFSVPEGVPAPRSL 91

Query: 113 DKMFTKSIRAWVQMLAEARTGNAGYGG----SFANWPRTLADIESGALPFETPAALSDRW 168
             +F +          E   G+A   G    + A   +T A  + G L    P+    RW
Sbjct: 92  RNVFRE---------IETDLGHASDEGKKRHADALPEKTAAGHDGGGL--RPPSTDLTRW 140

Query: 169 TDDGVLLLNTSFTLSRFQVAIDPHQSHGHLVL-WKPLIQAVLAHLSKRGEPLVCMGFGAS 227
              GVLLLNT  T       ++  Q+H H  L W+ +  AV+  L +   P+  + +G  
Sbjct: 141 ARQGVLLLNTVLT-------VEAGQAHSHARLGWQEVTAAVVEALGRCPRPMAFLLWGRH 193

Query: 228 AAEAFAAAGIGEGRNGNVACILREHPAYADAVLGL--PNPFALCNTHLAEMGSAPIHW 283
                 AA  GEG   +   +   HP+   A  G      F+  NT L   G  PI W
Sbjct: 194 ------AAAYGEGLAAHHLVLHAAHPSPLSAFRGFFGCRHFSQVNTWLRARGLDPIEW 245