Pairwise Alignments

Query, 541 a.a., Oxidoreductase, GMC family from Variovorax sp. SCN45

Subject, 567 a.a., Choline dehydrogenase (EC 1.1.99.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  429 bits (1102), Expect = e-124
 Identities = 243/538 (45%), Positives = 320/538 (59%), Gaps = 16/538 (2%)

Query: 7   YDYIIVGAGSAGCALAARLSARPATRVLLLEAGGKDSNPLFR--LPMLMGKLFQSGIYNW 64
           +DYII+GAGSAG  LA RL+      VLLLEAGG D    FR  +P  +    Q   YNW
Sbjct: 5   FDYIIIGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 64

Query: 65  HFHTEPEPNLDGRKIYWPRGKVLGGTSTINGMIYVRGGKQDYDGWAAM-GNPGWSYKDVL 123
            + T+PEP+++GR++   RGK LGG+S INGM Y+RG   DYD WA + G   W+Y D L
Sbjct: 65  AYETDPEPHMNGRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWAKLPGLEDWTYLDCL 124

Query: 124 PAFKRSEGHIQRDGVFHNAKGELTVCRAR-GWNALLDVFCAAGQQAGYPLNDDFNGASQL 182
           P F+++E        +H   G ++V   + G N L      AG QAGYP  +D NG  Q 
Sbjct: 125 PYFRKAETRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGYQQE 184

Query: 183 GFGRYDFTIR-NGKRWSTSFAFLRPALKRSNLKVVTRARTHKVLIERARAVGVSYEVQGQ 241
           GFG  D T+  NG+R ST+  +L  A KRS L +VT A T K+L E  RAVGV Y V   
Sbjct: 185 GFGPMDRTVTPNGRRASTARGYLDVAKKRSTLTIVTHALTDKILFEGKRAVGVRYLVGAA 244

Query: 242 MQTV--RARKEVILCAGVVGSPHLLMLSGIGPKDELEQHGIAVLKPLPGVGGNLQDHVDC 299
            + V  RARKEV+LC+G + SP +L  SG+GP   LE   I V+  LPGVG NLQDH++ 
Sbjct: 245 EERVEARARKEVLLCSGAIASPQILQRSGVGPAKLLESLDIPVVHDLPGVGENLQDHLEL 304

Query: 300 VMSYECKQPVTLYKDLRFDKIAFSVVQGMLFGEGITTTFPYEAGAFIKTSPELANPDVQL 359
            + Y C QPV+LY  L +        + +  G GI  +  +EAG FI+T PE   P++Q 
Sbjct: 305 YLQYACTQPVSLYPSLLWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRTRPEFDWPNIQY 364

Query: 360 HFMPALEKTANLYFPNPFKKSTVEAKHGFTLRVGPVNPNSKGRIRLRSGRPTDAPMIQPN 419
           HF+P             +  S    +HGF   +G +   S+GRI+ +S  P   P I  N
Sbjct: 365 HFLPVAIN---------YNGSNGVKEHGFQAHMGSMRSPSRGRIQAKSKDPRQHPSILFN 415

Query: 420 YLDTEFDRKTMVDAIRATRRIIDQPAFDDYRGKEIAPGPDKQSDEDLVAWLRATAMTTFH 479
           Y+ TE D +   D IR TR I+ QPA D +RG+EI+PG + Q+D  L  ++R  A T FH
Sbjct: 416 YMATEQDWQEFRDGIRLTREIMQQPALDPFRGREISPGIEVQTDAQLDQFIREHAETAFH 475

Query: 480 PVGTCKMGHDELAVVDHRLKVHGIEGLRVADASIMPVISSGNTNAPAIMIGEKCAEFI 537
           P  +CKMG D++AVVD   +VHG++GLRV DASIMP+I++GN NAP IMI EK A+ I
Sbjct: 476 PSCSCKMGTDDMAVVDGEGRVHGMQGLRVVDASIMPIITTGNLNAPTIMIAEKIADKI 533