Pairwise Alignments

Query, 541 a.a., Oxidoreductase, GMC family from Variovorax sp. SCN45

Subject, 568 a.a., choline dehydrogenase from Pseudomonas syringae pv. syringae B728a

 Score =  438 bits (1126), Expect = e-127
 Identities = 248/549 (45%), Positives = 330/549 (60%), Gaps = 18/549 (3%)

Query: 1   MNDKNDYDYIIVGAGSAGCALAARLSARPATRVLLLEAGGKDSNPLFR--LPMLMGKLFQ 58
           M  +++YDYII+GAGSAG  LAARL+      VLLLEAGG D    FR  +P  +    Q
Sbjct: 1   MTTQSEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQ 60

Query: 59  SGIYNWHFHTEPEPNLDGRKIYWPRGKVLGGTSTINGMIYVRGGKQDYDGWAAM-GNPGW 117
              YNW + TEPEP+++ R++   RGK LGG+S INGM Y+RG   DYDGWA   G   W
Sbjct: 61  GRRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLEDW 120

Query: 118 SYKDVLPAFKRSEGHIQRDGVFHNAKGELTVCRAR-GWNALLDVFCAAGQQAGYPLNDDF 176
           SY D LP F+++E        +H  +G ++V   + G N L      AG QAG+P  DD 
Sbjct: 121 SYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGFPRTDDL 180

Query: 177 NGASQLGFGRYDFTIR-NGKRWSTSFAFLRPALKRSNLKVVTRARTHKVLIERARAVGVS 235
           NG  Q GFG  D T+  NG+R ST+  +L  A KRS L +VT A T ++L E  RAVGV+
Sbjct: 181 NGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFEGKRAVGVA 240

Query: 236 YEVQGQMQT---VRARKEVILCAGVVGSPHLLMLSGIGPKDELEQHGIAVLKPLPGVGGN 292
           Y V G   T    RARKEV+LC G + SP +L  SG+GP + L +  I V+  LPGVG N
Sbjct: 241 YLV-GDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLPGVGQN 299

Query: 293 LQDHVDCVMSYECKQPVTLYKDLRFDKIAFSVVQGMLFGEGITTTFPYEAGAFIKTSPEL 352
           LQDH++  + Y C QPV+LY  L++        + M  G GI  +  +EAG FI++S   
Sbjct: 300 LQDHLEMYLQYACTQPVSLYPSLKWWNQPAIGAEWMFLGTGIGASNQFEAGGFIRSSEAF 359

Query: 353 ANPDVQLHFMPALEKTANLYFPNPFKKSTVEAKHGFTLRVGPVNPNSKGRIRLRSGRPTD 412
             P++Q HF+P             +  +    +HGF   VG +   S+GR++++S  P +
Sbjct: 360 EWPNIQYHFLPVAIN---------YNGTKGVQEHGFQAHVGSMRSPSRGRVQVKSKDPRE 410

Query: 413 APMIQPNYLDTEFDRKTMVDAIRATRRIIDQPAFDDYRGKEIAPGPDKQSDEDLVAWLRA 472
            P I  NY+ +E D +   D IR TR I+ QPA D YRG+EI+PG D QSDE L  ++R 
Sbjct: 411 YPSILFNYMASEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQSDEALDQFVRE 470

Query: 473 TAMTTFHPVGTCKMGHDELAVVDHRLKVHGIEGLRVADASIMPVISSGNTNAPAIMIGEK 532
            A T +HP  +CKMG DE+AVVD + +VHG++ LRV DASIMP+I++GN NAP IMI EK
Sbjct: 471 HAETAYHPSCSCKMGTDEMAVVDGQGRVHGLQSLRVVDASIMPIITTGNLNAPTIMIAEK 530

Query: 533 CAEFILAGQ 541
            A+ I   Q
Sbjct: 531 IADKIRGRQ 539