Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 306 a.a., nucleoside ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 9/276 (3%)

Query: 12  GTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAMLIAVGLCVAAS 71
           GTP ++V+L   L +++G  NLGLEG+++ G+ +       +GS    +  A G+ +   
Sbjct: 21  GTPFLFVSLGECLTEKSGRINLGLEGILVAGAMSGYAVACLSGSAWLGVGAAAGVGILLG 80

Query: 72  ALLWWVVERLKANPIIAGLGLTGLGLGGTSLAIQALYDSEATVTAPFGIPKLNSLFGADL 131
            L        + N I  G+ L  LG G      +A    +A +     +      + ++ 
Sbjct: 81  LLHGLACSLPRVNDIAFGIALILLGTGLAFFLGKAFIQPQAPMLPSLAL----GAWSSEE 136

Query: 132 GPFGGLSVFVLLMPVAVWLVWLL---LERTRLGLQMSASGEHPFAARSVGVNPSRMRLLA 188
                L++ VL   V   L ++L   L  TR GL +   G+H   A+++G  P ++R++A
Sbjct: 137 RVRSALNINVLFF-VGAALAFVLHWGLRTTRWGLMLRLVGDHAETAQALGYRPLKVRIVA 195

Query: 189 LALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFGAGGALGATAAALFFAVVS 248
            A+GG L  IGGA L+      +++ +++G+G MA A VIF     L    A+L F    
Sbjct: 196 TAVGGGLAGIGGAYLSLYYPGSWNEGLSSGQGLMAVALVIFARWRPLACLWASLLFGAAG 255

Query: 249 ALGIRAQLVYGGAISNDLLQSLPYLATIFGVWLSTR 284
           A+G   Q V G +    L  + PY  T+  ++ + R
Sbjct: 256 AIGPALQAV-GISTGYYLFAAAPYALTLVVMYATCR 290