Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 292 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 21/235 (8%)

Query: 32  NLGLEGLMIIGSCALIVGIVQTGSFAQAMLIAVGLCVAASALLWWVVERLKANPIIAGLG 91
           +L ++G   +G+    V I+   +   A  +A+    AA  +   +  R K   ++A + 
Sbjct: 34  DLTVDGSFPLGAAVTAVLIIAGVNPWLAAAVAMVAGAAAGMVTALLNVRFKILNLLASI- 92

Query: 92  LTGLGLGGTSLAIQ-----ALYDSEATVTAPFGIPKLNSLFGADLGPFGGLSVFV-LLMP 145
           LT + L   +L +      AL +++ T+ +PF        +G  L  F    +FV +L+ 
Sbjct: 93  LTMIALFSVNLRVMGKPNVALINAD-TMLSPF--------YGLGLRDFYVRPLFVGILVA 143

Query: 146 VAVWLVWLLLERTRLGLQMSASGEHPFAARSVGVNPSRMRLLALALGGVLCAIGGAELA- 204
            AV LVW  LE +  GL M A+G +   AR+ GV+ SR   L +A+   L A+GGA  A 
Sbjct: 144 FAVVLVWRFLE-SDAGLAMRATGANARMARAQGVDTSRQIYLGMAISNALVALGGALFAQ 202

Query: 205 -GGSLQIFS--QNMTAGRGFMAFAAVIFGAGGALGATAAALFFAVVSALGIRAQL 256
             G   + S    +  G   +     + GA G L A    +  +++  + I+  L
Sbjct: 203 TNGFADVTSGVGTIVVGLAAVIIGETLLGARGILIALIGCVLGSILYRIAIQVAL 257