Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 360 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 25/240 (10%)

Query: 28  AGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAMLIAVGLCVAASA--LLWWVVERLKANP 85
           AGI +L +  +M++ S  +     + G F  A+ +  GL V A    +   +V R+K  P
Sbjct: 100 AGI-DLSVGAIMVLSSVIMGQFTFRYG-FPPALSVICGLGVGALCGYINGTLVARMKLPP 157

Query: 86  IIAGLGLTGLGLGGTSLAIQALYDSEATVTAP--FGIPKLNSLFGADLGPFGGLSVF-VL 142
            I  LG+  +      LA   LY +  T+ A        +   FG +      +  + V+
Sbjct: 158 FIVTLGMWQI-----VLASNFLYSANETIRAQDISANASILQFFGQNFRIGNAVFTYGVV 212

Query: 143 LMPVAVWLVWLLLERTRLGLQMSASGEHPFAARSVGVNPSRMRLLALALGGVLCAIGGAE 202
           +M + V L+W +L RT  G  + A G+ P AA+  GVN +RM +    L G++CA+ G  
Sbjct: 213 VMVLLVCLLWYVLNRTAWGRYVYAVGDDPEAAKLAGVNVTRMLISIYTLSGLICALAGWA 272

Query: 203 LAGGSLQIFSQNMTAGR--GFMAFAAVIFGA-------GGALGATAAALFFAVVSALGIR 253
           L G   +I S + TAG+     +  AV+ G        G  +G    AL   V S LG+R
Sbjct: 273 LIG---RIGSVSPTAGQFANIESITAVVIGGISLFGGRGSIMGMLFGALIVGVFS-LGLR 328