Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 310 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  126 bits (316), Expect = 7e-34
 Identities = 91/278 (32%), Positives = 139/278 (50%), Gaps = 10/278 (3%)

Query: 5   LVSILISGTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAMLIAV 64
           L +++   TPL++  +  ++ QRAGIWN+ +EG M++G+    V    TGS   A+ +AV
Sbjct: 14  LAAMVRIATPLLFSAMGELVTQRAGIWNISVEGTMLLGAVVAYVIASSTGSPWLALFVAV 73

Query: 65  GLCVAASALLWWVVERLKANPIIAGLGLTGLGLGGTSLAIQA-LYDSEATVTAPFGIPKL 123
             C   S +L +V   LK+   IAGL L  L  G T    Q  +   +    A F   ++
Sbjct: 74  LACALLSVILSFVTIVLKSEQFIAGLALNLLASGLTLFWFQTYIIGRDPPKFAGFEAVEI 133

Query: 124 NSL-----FGADLGPFGGLSVFVLLMPVAVWLVWLLLERTRLGLQMSASGEHPFAARSVG 178
             L      G  L     L+    L+P+AVW     L RTR GL++   GE+P A    G
Sbjct: 134 QYLSDIPVLGTVLFSQRVLTYVSFLLPLAVWF---FLYRTRYGLEVRCVGENPKALDVKG 190

Query: 179 VNPSRMRLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFGAGGALGAT 238
           ++    R LA+  G V+   GGA L  G    F  ++ AGRG++   A+I G        
Sbjct: 191 LSVGSRRCLAIMFGSVMSGFGGAFLMLGYSDRFVPDLIAGRGWLVVVAIIAGNWMPFRVV 250

Query: 239 AAALFFAVVSALGIRAQLVYGGAISNDLLQSLPYLATI 276
            A   FA++ A+GI AQ+V G ++ + +   LPY+A++
Sbjct: 251 GAIFIFALLEAVGIHAQVV-GVSVPHHVFLVLPYVASL 287