Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  112 bits (281), Expect = 8e-30
 Identities = 83/271 (30%), Positives = 139/271 (51%), Gaps = 8/271 (2%)

Query: 9   LISGTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAMLIAVG-LC 67
           +I+ TPLI+  L  ++ +++G+ NLGLEG+M++G+      ++        + IA G L 
Sbjct: 12  IIAATPLIFAALGELVVEKSGVLNLGLEGMMLMGAAFAFWAVI--AGLPMPVAIAAGALA 69

Query: 68  VAASALLWWVVE-RLKANPIIAGLGLTGLGLGGTSLAIQALYDSEATVTAPFGIPKLNSL 126
            AA++LL+ V+      N   AGL L   G G ++   +    +         IP L+ +
Sbjct: 70  GAATSLLFGVLALTFLTNQYAAGLALAIFGSGVSAFLGRGFGSAPIDALKRVHIPFLSDI 129

Query: 127 FGADLGP-FGGLSVFVLLMPVAVWLVWLLLERTRLGLQMSASGEHPFAARSVGVNPSRMR 185
               +GP F      V L      L+   L RT+ GL +   GE P  + ++G    R+R
Sbjct: 130 --PVVGPMFFRFDPMVYLAIGMFGLITWFLYRTKGGLILRTIGESPETSHAIGYPVIRIR 187

Query: 186 LLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFGAGGALGATAAALFFA 245
            LA+  GG++  + GA L+     ++ +NMTAG+G+++ A V+F     L     A  F 
Sbjct: 188 YLAVLFGGLMAGLAGAYLSVAYTPLWVENMTAGKGWISLALVVFATWRPLRVLIGAWLFG 247

Query: 246 VVSALGIRAQLVYGGAISNDLLQSLPYLATI 276
            ++ L ++ Q + G A+ ++LL +LPYLATI
Sbjct: 248 GMTILQLQGQAL-GIAVPSELLSALPYLATI 277