Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 340 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 90.5 bits (223), Expect = 5e-23
 Identities = 76/268 (28%), Positives = 113/268 (42%), Gaps = 14/268 (5%)

Query: 2   TDTLVSILISGTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGSCALI-VGIVQTGSFAQAM 60
           T+ L   L+  +PLI +     +  RA IWN+G EG +IIG+ A   VG+      +  +
Sbjct: 43  TNGLSEWLLKASPLILIACGLAVGFRANIWNIGAEGQLIIGAIAACGVGLFYPDPESPLL 102

Query: 61  LIAVGLCVAASALLWWVVE-----RLKANPIIAGLGLTGLGLGGTSLAIQALYDSEATVT 115
           +  + L  A + + W  +      R+  N I+  L LT +     +L +  L        
Sbjct: 103 IPLMFLAGAGAGMAWAAIPAFLRARMNTNEILVTLMLTYIA----TLLLSFLVHGPWRDP 158

Query: 116 APFGIPKLNSLFGADL-GPFG---GLSVFVLLMPVAVWLVWLLLERTRLGLQMSASGEHP 171
           A F  P+   L  A +  PF     L+  + +  VAV ++WL  +R+ LG +MS SG  P
Sbjct: 159 AGFNYPQTALLPAAAMFEPFDYSYRLNPSIFITAVAVVMMWLFTDRSFLGYKMSVSGAAP 218

Query: 172 FAARSVGVNPSRMRLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFGA 231
            AAR  G   S      L  GG    I G     G L   S  ++ G GF A      G 
Sbjct: 219 LAARYAGFRESSAVWTGLLAGGAAAGIAGMAEVAGPLGQLSPQISPGYGFAAIIVAFIGR 278

Query: 232 GGALGATAAALFFAVVSALGIRAQLVYG 259
             A G     L  +++   G   Q+  G
Sbjct: 279 LNAFGIVLGGLLMSLLFLGGETVQMTLG 306