Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 31/236 (13%)

Query: 6   VSILISGTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGS-----CALIVGIVQTGS---FA 57
           ++IL+   P++     G LA  AG+  +  E  + IGS       L+  +V  G     A
Sbjct: 82  LTILMKAIPVL-----GCLALGAGVLMIAGEFDLSIGSVYTFTAVLMASLVNAGLSAFIA 136

Query: 58  QAMLIAVGLCVAASALLWWVVERLKANPIIAGLGLTGLGLGGTSL---AIQALYDSEATV 114
             + I  GL + +  L   +  R      I  LG      G   L   A+Q  +D E   
Sbjct: 137 APIAILTGLLIGS--LNGHITLRFGLPSFIVTLGGLLFWRGAVLLYNGAVQVRFDPE--- 191

Query: 115 TAPFGIPKLNSLFGADLGPFGGLSVFVLLMPVAVWLVWLLLERTRLGLQMSASGEHPFAA 174
                 P   SLF   L  FG  + F+ ++ + V    LLL R R G  + A+G +  AA
Sbjct: 192 ------PVFTSLFSGTL--FGVNAAFIWIV-LFVTGFHLLLHRHRFGNHVFATGGNRGAA 242

Query: 175 RSVGVNPSRMRLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFG 230
            ++G+N SR++L+A A+ G + A+ G  LA   +        AG    A AA + G
Sbjct: 243 EAIGINTSRVKLIAFAIAGGMAAVAGI-LATARVGSVQPGQGAGLELQAIAACVIG 297