Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 365 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 9/253 (3%)

Query: 2   TDTLVSILISGTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGS-CALIVGIVQTGSFAQAM 60
           T ++  IL+  TPLI + +   +A R  IWN+G EG    G+  A   G+   G  A   
Sbjct: 71  TRSIAEILLKATPLILIGVGLCVAFRCSIWNIGAEGQFYAGAIAATAAGVSFDGLTAWIY 130

Query: 61  LIAVGLCVAASALLWWVVERL-----KANPIIAGLGLTGLGLGGTSLAIQALYDSEATVT 115
           +  V +  A +   W  +  L     +A+ I+  + L  + +  TS  +      +A   
Sbjct: 131 VPLVMIAGALAGAAWAAIAGLLKVYFRASEIVTTIMLNYIAIIMTSYLVTGPL-RDAAAA 189

Query: 116 APFGIPKLNSLFGADLGPFGGLSVFVLLMPVAVWLVWLLLERTRLGLQMSASGEHPFAAR 175
            P     +   +   + P   L + +L+      ++++ L R+  G  +   G  P AAR
Sbjct: 190 YPQSARLVQEAWMPRILPPTRLHIGILVALALAVVMYIFLFRSTRGYALRVVGISPDAAR 249

Query: 176 SVGVNPSRMRLLALALGGVLCAIGGA-ELAGGSLQIFSQNMTAGRGFMAFAAVIFGAGGA 234
             G++  R  +L++ L G +  + GA E+AG + ++F Q+++ G GF   A  +      
Sbjct: 250 YAGISVPRNIMLSICLSGSMAGLAGAFEIAGVTRRLF-QSISPGYGFEGIAVALLANNNP 308

Query: 235 LGATAAALFFAVV 247
           +GA  + L FA++
Sbjct: 309 IGAVFSGLLFAIL 321