Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 310 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 1e-32
 Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 17/292 (5%)

Query: 14  PLIYVTLAGVLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAMLIAVGLCVAASAL 73
           PL++ ++  V ++RAG+ N+GLEG+M+ G+ A       +GS    +  AV   V    L
Sbjct: 23  PLMFASIGEVFSERAGVLNIGLEGVMLAGAFAGFAAAFTSGSILLGVAAAVAAGVLVGLL 82

Query: 74  LWWVVERLKANPIIAGLGLTGLGLGGTSLAIQALYDSEA---TVTAPFGIPKLNSLFGAD 130
             +    +KA+ I+ G  +  LGLG T+   +A + S      +  P  +P L+ L    
Sbjct: 83  FAFFTITIKADQIVVGAAINLLGLGLTAFLFRAYFSSAGKGIEIAKPVDLPWLSDL---- 138

Query: 131 LGPFGGLSVF------VLLMPVAVWLVWLLLERTRLGLQMSASGEHPFAARSVGVNPSRM 184
             PF G + F         +PVA   V++L  RT  GL + A GEHP A    G + +  
Sbjct: 139 --PFFGEAFFRQNAFVYSTLPVAALAVFVLY-RTSFGLTLRAVGEHPKAVDVSGRSVALY 195

Query: 185 RLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFGAGGALGATAAALFF 244
           R  A+ +   L A+GGA L       F + +++GRGF+A A V+F     +GA   +L F
Sbjct: 196 RYGAVLICSALAALGGAFLTLAHSNQFVEGISSGRGFIALAVVVFARWSPIGAFIVSLLF 255

Query: 245 AVVSALGIRAQLVYGGAISNDLLQSLPYLATIFGVWLSTRLRGGLGSIRGTA 296
            V  AL ++ Q      +   L Q+LPY+ TI  + L  R R    S+ G A
Sbjct: 256 GVFYALQLQLQAQPVLFLPYQLFQALPYVMTIAALIL-VRNRVDTPSMLGVA 306