Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 339 a.a., ribose ABC transporter permease from Klebsiella michiganensis M5al

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 28/223 (12%)

Query: 41  IGSCALIVGIVQTGSFAQ------AMLIAVGLCVAASALLWWVVERLKANPIIAGLGLTG 94
           +GS   + G+V   +         A+L  VG+      L   +   L   P I  LG T 
Sbjct: 81  VGSIVAVSGVVSVVAAMAGIPAPLAILAGVGVGALCGLLNGVLTAYLALAPFIVTLG-TM 139

Query: 95  LGLGGTSLAIQALYDSEATVTAPFGIPKLNSLFGADLGPFGGLSVFVLLMPVAVWLVWLL 154
             L G +  I    + +  V++     +L +      G   G+ + V++M V   L W +
Sbjct: 140 TFLRGMAYTIT---EGQPIVSSSLSFRELGN------GYLIGIPIPVIIMLVVYLLAWFI 190

Query: 155 LERTRLGLQMSASGEHPFAARSVGVNPSRMRLLALALGGVLCAIGGAELAGGSLQIFSQN 214
           LERTR G  + A G +  AAR  GV   R+      + GV   + G   A    ++ S  
Sbjct: 191 LERTRFGRHIYAVGGNAQAARLAGVRVKRVLAAVYMIAGVCAGLAGIIFAA---RVISAQ 247

Query: 215 MTAGRGFM--AFAAVIFG----AGG---ALGATAAALFFAVVS 248
            TAG G+   A AAV+ G    AGG    +G    ++   V+S
Sbjct: 248 PTAGTGYELDAIAAVVLGGTSLAGGRGRIIGTLIGSIILGVLS 290