Pairwise Alignments

Query, 300 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 316 a.a., branched-chain amino acid ABC transporter permease from Klebsiella michiganensis M5al

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 78/275 (28%), Positives = 123/275 (44%), Gaps = 31/275 (11%)

Query: 3   DTLVSILISGTPL--IYVTLAGVLAQRAGIW---NLGLEGLMIIGSCALIVG-------- 49
           DTL+  +I+G  L  IY  +A       GI    N     ++++G+   + G        
Sbjct: 2   DTLIQQIINGVMLGSIYALIALGYTMVYGILRIINFAHGDILMVGALTTLSGMHALNAHF 61

Query: 50  --IVQTGSFAQAMLIAVGLC-VAASALLWWVVERLKANPIIAGLGLTGLGLGGTSLAIQA 106
             +        A+L+A+ +C + A A+  +   RL+  P +A L ++G+G+      +  
Sbjct: 62  PTLPPLAQLGLALLLAMTVCALLAMAVERFAYRRLRNAPRLAPL-ISGIGVSVLLQTVAM 120

Query: 107 LYDSEATVTAPFGIPK--LNSLFGADLGP-----FGGLSVFVLLMPVAVWLVWLLLERTR 159
           +  S   +  P  +P   +    G+   P       G+    L + V + L WLL+E TR
Sbjct: 121 IVWSRNPLMFPQILPMDPIAVTHGSAAHPPALITVTGIVTVALALTVMLGL-WLLVEYTR 179

Query: 160 LGLQMSASGEHPFAARSVGVNPSRMRLLALALGGVLCAIGGAELAG--GSLQIFSQNMTA 217
           LG  M A  E+P  A  +GVNP+ +  L  A+GGV  A+ G  +A   GS   FS     
Sbjct: 180 LGRGMRAVAENPRIATLMGVNPNAIIALTFAIGGVFAALAGVMMASNYGSAG-FSMGFLP 238

Query: 218 GRGFMAF-AAVIFGAGGALGATAAALFFAVVSALG 251
             G  AF AAV+ G G   GA    L   ++ +LG
Sbjct: 239 --GIKAFTAAVLGGIGNIRGAMIGGLLLGLIESLG 271