Pairwise Alignments

Query, 348 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

Subject, 679 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  137 bits (344), Expect = 1e-36
 Identities = 105/344 (30%), Positives = 165/344 (47%), Gaps = 20/344 (5%)

Query: 15  FHTIVEQMVAGIYVIQDDCFVYCNATWAAI-AGYTVQEATGMSLAQIVPPDFLEVVRSRI 73
           +  +V+ +  G+ +++     Y NA    + AG  +Q        + V     E  R+R 
Sbjct: 340 YERMVDGLPDGVLMLRQGRIHYANAAARRLLAGDPLQPLDAQPFIEFVA----EHQRARE 395

Query: 74  RARLAE--------QPPSMHFITRGLHRDGSVRLVEVHGTRITYRGRPAVMGVGVDVTDR 125
            ARLA         QP  +  + R    DG     EV  T +   G   V  +  DV+  
Sbjct: 396 TARLAALQRGAAAGQPQRLLLVCR----DGQPFEAEVSETLLPADGDAEVQLLIRDVSQA 451

Query: 126 VRNEEELKRSREQLQALAAYTANKLEEQRLAMARDVHDVLGGMLTSIKMDATR-IQRRAE 184
            +   +L+ + ++LQ L+       E +R  +ARD+HD +G  LT +K+   R I+R+A 
Sbjct: 452 EQLRRDLEDANQRLQHLSQRLIEVQEIERREVARDLHDDVGQHLTGLKLHLQRLIRRQAG 511

Query: 185 NPEMQSLTRDLIALTQQTIDTVKQISEALRPSALDHLDLSVALANELHAFTRRSGVPHAL 244
           + E + L++ L+A     +  V+ +S +L P  L+ L L  A+   L  F   SG    L
Sbjct: 512 DSEFERLSQPLVASMDAALAKVRSLSLSLHPLQLETLGLEAAVRWHLQHFLEASGTCWEL 571

Query: 245 DTGTATPRLLPRHTTAVYRIFQEGLTNVSRHSKASHVGVTLRVEGAQLVLELHDDGCGFD 304
           +   +T  + P    A +R+ QE + NV+RH++A  V + +  +  +L LE+ DDG GFD
Sbjct: 572 EVRGSTTEIPPGRAVAAFRLVQEAVNNVARHARARTVRILMVCDEHELRLEILDDGRGFD 631

Query: 305 T--RTPGGSALGLLSMRERAREIGGELRIESAPGRGTRLALRAP 346
                 G  +LGL SM ER    GG+LRI S PG GTR+    P
Sbjct: 632 VPEALQGAQSLGLTSMHERVASFGGDLRISSLPGMGTRITALLP 675