Pairwise Alignments

Query, 504 a.a., RND efflux system, outer membrane lipoprotein, NodT family from Variovorax sp. SCN45

Subject, 495 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  194 bits (493), Expect = 6e-54
 Identities = 144/479 (30%), Positives = 217/479 (45%), Gaps = 14/479 (2%)

Query: 4   KTSLATPVAAGIALLLGGCAAGPDYVRPPLNLPTQYTSAPASSTEAEGVPLPRFSPDLDV 63
           K +L     A +AL LG C  GPDY RP L + +++  A           L R       
Sbjct: 12  KHALRPLAVAVLALSLGACTLGPDYQRPDLPVASEFKQAEGWKPATPADALQR------- 64

Query: 64  PAQWWQAFRSEPLNALVVQSLAGNPTIEAADAALRVAQENEAADRAAFWPTVA--LGYSP 121
             +WW+ +    L+ALV +    N  I AA+A  R A+      R+  +P ++   G S 
Sbjct: 65  -GEWWRLYGDAELDALVSRLNVSNQNIAAAEAQFRQARALVRGARSQLFPILSGSAGVSR 123

Query: 122 TRQRVAGAVASPVSSNANLYTLHTAQVTVSYTPDVFGATRRQVEGAQAQTEQQRFQTLAA 181
           + Q      ++  + N  +   + A ++ S+  D++G  RR +E  +A  +       AA
Sbjct: 124 SAQGSGSTSSTGSTFNGGVGESYEAGLSASWEADIWGRLRRNLEANRANMQASAADLAAA 183

Query: 182 KLSLSSNVVAAAITEASLRAQQRATQAIIADQKEVLQAYRKQLGLGQVAVADVDAQEASL 241
           +LSL + +V   +    +   QR     +      L+    Q   G V  +DV   +  L
Sbjct: 184 RLSLQAELVQTYLQLRVIDEHQRLLDQTVEAYARSLRLTENQYRAGIVPRSDVSQAQTQL 243

Query: 242 AATEATLPPLDKQLAQQRNLLATLAGRYPSE-GVAAHFELDALQLPGELPRTLPSTLVEH 300
            +T+A    L  Q AQ  + +A L G  PSE G+A   ++  L     +P  +PS L+E 
Sbjct: 244 KSTQAQAIDLKWQRAQMEHAIAVLVGVAPSELGIAVREDIPPLPA---IPLAVPSQLLER 300

Query: 301 RPDVRAAEAQLQAASAAIGVAVAARLPNVTLGASYGSSAYTLSQLFKSSSLFWSLAGNVT 360
           RPD+ +AE Q+ AA+A IGVA AA  P +TL AS G    + S LF   + FWSL   + 
Sbjct: 301 RPDIASAERQVMAANANIGVAEAAWYPELTLSASGGYRNSSFSDLFSVPNRFWSLGPQLA 360

Query: 361 QTVFDGGALKHREAAARASFDQAGAQYRATVLSAFQDVANALEAIDADTRALQAAVKAER 420
            T+ D G  +     A AS+DQ  A YR TVL++F++V + L  +           +A  
Sbjct: 361 LTLLDFGGRRAELERAEASYDQTVASYRQTVLNSFREVEDYLVQLRVLEEEAVVQREALE 420

Query: 421 TASQSLARTRTQVRLGDASPLALRIAQQAEQQALLNLVQARALRLTDAAALFQALGGGW 479
            A +SL     Q R G    L++   Q          +     RLT +  L  ALGGGW
Sbjct: 421 AAQESLRLIENQYRAGTVDFLSVATVQTTALNNQRTNLTLLGDRLTASVLLIAALGGGW 479