Pairwise Alignments

Query, 139 a.a., Small-conductance mechanosensitive channel from Variovorax sp. SCN45

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 39/105 (37%), Positives = 61/105 (58%)

Query: 3   VIVNFTANPKRRIDLTVGVGYDDDLKVAKDTLLALAAAHPKVLKDPAPEVLVTALAESSV 62
           VI N T    RR+D+  G+GY DDL  A+  L  +  +HP VLK P P + V  L  SS+
Sbjct: 450 VIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSI 509

Query: 63  NLELRAWAKTGDLLHTKSDLVEAIRNELIGKGLNIPYPQRDLHVY 107
           +  +R W KT D      D+ + ++     +G++IP+PQ+D+H++
Sbjct: 510 DFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGISIPFPQQDVHLH 554