Pairwise Alignments

Query, 303 a.a., Transcriptional activator MetR from Variovorax sp. SCN45

Subject, 301 a.a., transcriptional activator protein MetR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  189 bits (479), Expect = 9e-53
 Identities = 96/270 (35%), Positives = 158/270 (58%), Gaps = 1/270 (0%)

Query: 1   MLERTHLSIVQEVDKQGSLTAAAEVLHLTQSALSHSIRKLEAQLGTEIWQREGRSLRLTQ 60
           M+E  HL  +  + + GSL  AA+   +TQSALSH I++LE ++ + I+ R+ + L  TQ
Sbjct: 1   MIELRHLRTLMALKESGSLAGAAKKRFVTQSALSHQIKELEQRINSPIFVRKSKPLSFTQ 60

Query: 61  AGQYLLAVANRVLPQLDLAEERLRQFAQGERGSLRIGMECHPCYQWLLKVVSPYLASWPD 120
            G  LL +A  +LP++   E  L+   + +   LR+G+ECH C++WL+ V+  +    P 
Sbjct: 61  EGARLLHLAEEILPKVLETETDLKNGLETDTNQLRVGIECHSCFRWLMPVMEQFRQDHPQ 120

Query: 121 VDVDVKQKFQFGGIGALFGYEIDLLVTPDPLYKPGLHYEPVFDYEQVLVVPRGHALANVP 180
            ++D+  +  F  + AL   E+D+++T DP+    L Y+ +FD+E  LVV + H LA   
Sbjct: 121 AELDLSSRHLFDSLNALEMGELDIVLTSDPVPGHSLAYQHLFDFEVKLVVAKDHPLAKEA 180

Query: 181 HVKPEHLTQEVLVTYPVATDRLDIYNMFLMPAGVTPRRHKAIETTDIMLQMVASGRGVAA 240
           +V P+ L++  +++YPV   RLDIY  FL PAG+     K  + T ++LQ +A   G+AA
Sbjct: 181 YVTPKQLSRLPIISYPVPLARLDIYRHFLEPAGIEAGEQKTCDLTMMLLQRIACKDGIAA 240

Query: 241 LPRWLVEEYAEKMDIVPVRLGPRGIAKQIF 270
           LP W + E    + +  V+LG  G+ + +F
Sbjct: 241 LPNWSINE-GHGLSLAAVKLGQEGLKRPLF 269