Pairwise Alignments

Query, 178 a.a., RNA polymerase sigma factor RpoE from Variovorax sp. SCN45

Subject, 214 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 72.4 bits (176), Expect = 5e-18
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 3/149 (2%)

Query: 23  RLARRLGNSDQASDALQDTWLRLESRDDIDGVRDPASYLLRVAVNLAYDQLGKQGRLA-- 80
           +L R + +   A D  Q+T+LR+    +   +    ++L R A NLA D L +  R A  
Sbjct: 53  KLTRIVQDRQIAEDLTQETYLRVRRAAESGPIDHIEAFLHRTARNLALDHLRRTKRRAGM 112

Query: 81  -TPEEIDALLEDAPDPAPGPSQIAEDRSEMAALAALIARMPPRRRQVLVMVRWEHLPQRE 139
            +    D  ++D  D  P   +   +R  +  L+  +AR+P R R VL + R E  P  +
Sbjct: 113 GSSAVEDGAIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARLVLTLSRVEDWPNTK 172

Query: 140 VAARLGISLRTVEKELKDAHDFCAARMGR 168
           +AA LGIS RTV  +LK A   C   M R
Sbjct: 173 IAAHLGISERTVFNDLKLALGHCRDAMAR 201