Pairwise Alignments

Query, 462 a.a., protease Do from Variovorax sp. SCN45

Subject, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

 Score =  228 bits (580), Expect = 4e-64
 Identities = 155/454 (34%), Positives = 234/454 (51%), Gaps = 16/454 (3%)

Query: 9   LAALVTAAACLAPGLPLHAAMPWPASG-----LSQLVKAYGPAVVHIGVERPSAPARRFS 63
           L AL  + + +   LP  AA+P   +G     L+ +++   PAVV I VE      +R  
Sbjct: 9   LTALSLSLSAILSPLPATAALPLSVNGEQIPSLAPMLEKVTPAVVSIAVEGTQVSRQRLP 68

Query: 64  DRWLLRVPGQLPQPQA-EGDESSLGTGFIVS-DDGLILTNAHVVARGTQINVKLPDRREF 121
           D++        P  Q  E     LG+G I++ D G ++TN HV+    +I VKL D REF
Sbjct: 69  DQFRFFFGPDFPTEQLQERPFRGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREF 128

Query: 122 KARLVGLDAVADVALLKIDAA-GLPTVRIGDPSGVEPGDGVVAIGSPYGFGNSVTAGIVS 180
            A LVG D ++DVALLK++ A  L  +RI D   +  GD  VAIG+P+G G +VT+GIVS
Sbjct: 129 DAELVGGDEMSDVALLKLNKAKNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVS 188

Query: 181 AKGRLLPGAE-YMQFLQTDVPINPGNSGGPLFNLRGEVIGINSRIYSRSGGYQGLSFAIP 239
           A GR     E +  F+QTD  IN GNSGG L NL GE+IGIN+ I   +GG  G+ FAIP
Sbjct: 189 ALGRSGLNIENFENFIQTDAAINSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIP 248

Query: 240 IDAAMRIKDQLLSTGTVTRGRIGVSVQEVGQALADTFRLPRPAGALVNYVEPRGAADRGG 299
            +    + DQ+L  G V RG +GV   E+   LAD        GA V+ V P  AAD+ G
Sbjct: 249 SNMMKNLTDQILEFGEVKRGMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAG 308

Query: 300 LKPGDVILSVQGREVVQAADALGFIAEQAPGENIRLRVWRERAEQMLEVRVEGFDTPRLQ 359
           +K GD+I S+ G+++   ++    +A    G+ I L V R+   Q ++V +      + +
Sbjct: 309 IKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLGEQQNAKTK 368

Query: 360 ADAAQAPSAPSRLGFAVRPLAPAERQFLRVDGGLLVQRVNAAASRAGVQPGDLILALNGQ 419
           A++     + + L            +   V  G       +AA    +Q  D+I+ +N +
Sbjct: 369 AESLHQGLSGAELSNTTDSDPIQGVKVTEVQKG-------SAAESYQLQKDDIIIGVNRK 421

Query: 420 PIDSAEALVQELDVADGSAALLVQRGSTRIFVPI 453
            + +   L   ++ +    AL +QRG   +++ +
Sbjct: 422 RVKNIAELRAIMEKSPNILALNIQRGERTLYLVV 455