Pairwise Alignments

Query, 203 a.a., Na+-driven multidrug efflux pump from Variovorax sp. SCN45

Subject, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 5/168 (2%)

Query: 24  LFVINAILRGAGDAAISMRVLWLSNGLNIVLCPLLIFGPGPFPALGIEGAAIATCIGRGT 83
           L   N ++R  G A ++M  + +   +NI+L P+LI        +GI+GAAIAT + +  
Sbjct: 151 LVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVFN----MGIKGAAIATVLSQII 206

Query: 84  GVLYQLWALFRGGTHIRVTMAQLAWRGAMLWNIVRTSLGGIGQMIVAMTAWIFLMRILAT 143
           GV+Y L   F   T I+  M        +L   V        ++I++    I    +L  
Sbjct: 207 GVIYILKHQFGKNTSIKYAMNDFLINLKILKETVFIGASEFAKLIISSILLILGNNLLGI 266

Query: 144 IGSE-AVAGATIAIRIMMFTMMPAWGMSNAAATLVGQNLGAGHADRAA 190
            G + A+A   + +RI M  +MP  G+      +VG N G G  +R +
Sbjct: 267 YGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQPIVGYNYGKGQLNRVS 314