Pairwise Alignments

Query, 206 a.a., AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination from Variovorax sp. SCN45

Subject, 507 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

 Score =  123 bits (309), Expect = 5e-33
 Identities = 68/134 (50%), Positives = 91/134 (67%), Gaps = 2/134 (1%)

Query: 75  LRAIDGVLPAALAAADAGRRLVVPAGNGAEAALASRVEARTARTLSEVCAMLCERASLPR 134
           +R + GVLPAALAA    R LVVP  NG +AAL      ++A++L EVCA LC + +L  
Sbjct: 116 IRGVKGVLPAALAANQVERCLVVPHSNGDQAALVGVERHKSAQSLLEVCADLCGQQTLSL 175

Query: 135 AVAPPLAR--APELDMRDVRGQAQARRALEIAAAGGHHLLLIGPPGCGKTLLASRLPGLL 192
             + P  +  +   D++D+ GQ Q +RALEIAAAG H+LL +GPPG GKT+LASRL  LL
Sbjct: 176 FQSSPSVQQVSQTRDLQDIIGQQQGKRALEIAAAGNHNLLFLGPPGTGKTMLASRLCDLL 235

Query: 193 PEAGEDAALETAAI 206
           PE  ++ A+ETA+I
Sbjct: 236 PEMSDEEAMETASI 249