Pairwise Alignments

Query, 183 a.a., Protein translocase subunit SecY from Variovorax sp. SCN45

Subject, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella amazonensis SB2B

 Score =  186 bits (473), Expect = 4e-52
 Identities = 99/184 (53%), Positives = 131/184 (71%), Gaps = 9/184 (4%)

Query: 1   MARSGNAMAGIGGGLGKFTELRQRLLFVIGALIVYRIGSYITVPGINPEAMVKFMETKQG 60
           MA+ G  +    GGL   +EL+ RLLFVIGA+IV+R GS++ +PGI+   + +    ++G
Sbjct: 1   MAKPGLDLKSAKGGL---SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKG 57

Query: 61  TIVDMFNMFSGGALHRFSLFALNVMPYISASIIVQLLVQIVPSLKAIQKEGESGRRMINQ 120
           TI+ MFNMFSGGAL R S+FAL +MPYISASII+QLL  + P+L  ++KEGESGRR I+Q
Sbjct: 58  TILGMFNMFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRRKISQ 117

Query: 121 WSRMGAIPLAVFQAWGIAAGLQSSVAPDGVP-VVYAPGMGFILTAVIALTAGTMFLMWLG 179
           ++R G + L  FQ+ GIA GL     P+ VP +V  PG GF   A+++L  GTMFLMWLG
Sbjct: 118 YTRWGTLVLGTFQSVGIATGL-----PNLVPGLVVNPGFGFYFVAIVSLVTGTMFLMWLG 172

Query: 180 EQIT 183
           EQIT
Sbjct: 173 EQIT 176