Pairwise Alignments

Query, 183 a.a., Protein translocase subunit SecY from Variovorax sp. SCN45

Subject, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella sp. ANA-3

 Score =  181 bits (460), Expect = 1e-50
 Identities = 98/184 (53%), Positives = 130/184 (70%), Gaps = 9/184 (4%)

Query: 1   MARSGNAMAGIGGGLGKFTELRQRLLFVIGALIVYRIGSYITVPGINPEAMVKFMETKQG 60
           MA+ G  +    GGL   +EL+ RLLFVIGA+IV+R GS++ +PGI+   + +    ++G
Sbjct: 1   MAKPGLDLKSAKGGL---SELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKG 57

Query: 61  TIVDMFNMFSGGALHRFSLFALNVMPYISASIIVQLLVQIVPSLKAIQKEGESGRRMINQ 120
           TI+ MFNMFSGGAL R S+FAL +MPYISASII+QLL  + P+L  ++KEGESGR+ I+Q
Sbjct: 58  TILGMFNMFSGGALSRASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQ 117

Query: 121 WSRMGAIPLAVFQAWGIAAGLQSSVAPDGVP-VVYAPGMGFILTAVIALTAGTMFLMWLG 179
           ++R G + L  FQ+ GIA GL     P+ VP +V   G GF   AV++L  GTMFLMWLG
Sbjct: 118 YTRWGTLVLGTFQSIGIATGL-----PNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLG 172

Query: 180 EQIT 183
           EQIT
Sbjct: 173 EQIT 176