Pairwise Alignments

Query, 636 a.a., 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) from Variovorax sp. SCN45

Subject, 750 a.a., glycogen operon protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 5e-13
 Identities = 56/191 (29%), Positives = 78/191 (40%), Gaps = 29/191 (15%)

Query: 152 VYEVHL-GSWRRHD-------GQFLGYREIAHELAAYVKKMGFTHVELMPVT-------- 195
           +YE+HL G    H        G F G    A     Y+ K+G   VEL+P+         
Sbjct: 185 IYEMHLKGFTALHPEIDVPLRGTFAGLASKA--AIDYLVKLGVNCVELLPIQAFFSEPFL 242

Query: 196 -EHPFYGSWGYQTTGYFAPTARYGSPQD---FMYLVDHLHQQGIGVLLDWVPSHFPTDEH 251
            E      WGY + G+FAP   Y S +D   F  +VD LH  GI V+LD V +H      
Sbjct: 243 LEKQLSNYWGYNSIGFFAPEPSYLSSEDIIEFRTMVDALHGAGIEVILDVVYNHSAEGSR 302

Query: 252 -GLAF----FDGTHLY--EHADPRQGFHPEWNSSIFNYGRPEVRSFLVSSGLFWLDLYHL 304
            G  F     D    Y     D R   +     +  N   P +   ++ S  +W+ +  +
Sbjct: 303 LGPTFSFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNLNHPRMLQLVLDSLRYWVKVMGV 362

Query: 305 DGLRVDAVASM 315
           DG R D  AS+
Sbjct: 363 DGFRFDLAASL 373