Pairwise Alignments

Query, 147 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

 Score = 71.6 bits (174), Expect = 1e-17
 Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 12  PVGRLDKASEGLLLFCNDPQWAARITDPELGPDKTYRVQVDAIPDEAQLRALEAGVDD-D 70
           P+GRLDK S+GL+   ND     +I       +K Y V+VD       +R + +GV+  D
Sbjct: 112 PIGRLDKPSDGLIFLTNDGDIVNKILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILD 171

Query: 71  GERLRAKSVRLLRSGEKNAWLEIVLDEGRNRQIRRLLAAFGLETLLLVRVAIGELPLGEL 130
              L  K  +     E      IVL +G NRQIRR+  A G E   L RV I  + L  +
Sbjct: 172 TVTLPCKVTQ-----ETQYSFRIVLTQGLNRQIRRMCEALGYEVFKLRRVRIMNITLDGI 226

Query: 131 PKGQWRVLDEEDLRKL 146
           P G+WR L E ++ ++
Sbjct: 227 PNGKWRYLSEAEVSEI 242