Pairwise Alignments

Query, 147 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 68.9 bits (167), Expect = 5e-17
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 5/147 (3%)

Query: 2   LDGAPLPWLAPVGRLDKASEGLLLFCNDPQWAARITDPELGPDKTYRVQVDAIPDEAQ-L 60
           LD   +  L   GRLD  + GLLL  +D QW+ R+T P+   +KTYRV + A P +A   
Sbjct: 86  LDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHRVTSPKHKCEKTYRVWL-ADPIQADYA 144

Query: 61  RALEAGVDDDGERLRAKSVRLLRSGEKNAWLEIVLDEGRNRQIRRLLAAFGLETLLLVRV 120
                G++  GER      +L    E    L I   EG+  Q++R+ AA G + + L R 
Sbjct: 145 EQFNRGIELRGERELTLPAQLEVISETEVLLTI--HEGKYHQVKRMFAALGNKVIGLHRE 202

Query: 121 AIGELPLGE-LPKGQWRVLDEEDLRKL 146
            IG++ L E L  G++R L EE++  +
Sbjct: 203 RIGQITLDETLEPGEYRYLTEEEVASI 229