Pairwise Alignments

Query, 147 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

 Score = 99.4 bits (246), Expect = 3e-26
 Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 16/149 (10%)

Query: 3   DGAPLPWLAPVGRLDKASEGLLLFCNDPQWAARITDPELGPDKTYRVQVDAIPDEAQLRA 62
           D  P+  +   GRLD+ SEGLL+  ND    AR+T P+    KTY VQV+  P E+ L A
Sbjct: 90  DYIPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEA 149

Query: 63  LEAGVD-DDGERLRAK--------------SVRLLRSGEKNAWLEIVLDEGRNRQIRRLL 107
           L  GV   DG  L AK               VR  R+     WL I L EGRNRQ+RR+ 
Sbjct: 150 LRHGVTLKDGPTLPAKVDIMPEPTLWPRNPPVRF-RAAIPTTWLAITLMEGRNRQVRRMT 208

Query: 108 AAFGLETLLLVRVAIGELPLGELPKGQWR 136
           A  G  TL L+R ++G+  LG+L  G+WR
Sbjct: 209 AHIGFPTLRLIRYSMGDWNLGDLQPGEWR 237