Pairwise Alignments

Query, 147 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 320 a.a., ribosomal large subunit pseudouridine synthase B from Sinorhizobium meliloti 1021

 Score =  146 bits (368), Expect = 3e-40
 Identities = 80/146 (54%), Positives = 96/146 (65%)

Query: 2   LDGAPLPWLAPVGRLDKASEGLLLFCNDPQWAARITDPELGPDKTYRVQVDAIPDEAQLR 61
           LD   +P L+PVGRLDKASEGLLLF ND   A R+ DPE    K Y VQV  I  EA   
Sbjct: 170 LDNVDVPSLSPVGRLDKASEGLLLFTNDTVLAQRLLDPETHLGKVYHVQVRGIFGEAMAA 229

Query: 62  ALEAGVDDDGERLRAKSVRLLRSGEKNAWLEIVLDEGRNRQIRRLLAAFGLETLLLVRVA 121
            +  GV + GE LRA  V  L+ G++N+W+EI LDEGRNRQIRR+L   G E L L+RV+
Sbjct: 230 RMVEGVTEGGELLRALRVERLKGGDRNSWIEIELDEGRNRQIRRMLDVLGFECLRLLRVS 289

Query: 122 IGELPLGELPKGQWRVLDEEDLRKLR 147
           IGE+ LG+LPKG  R L E +   LR
Sbjct: 290 IGEIRLGDLPKGASRPLTEAEALYLR 315