Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 278 a.a., nitrate transport permease from Synechococcus elongatus PCC 7942

 Score =  108 bits (270), Expect = 2e-28
 Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 18/247 (7%)

Query: 112 LVALAVVLALWETFTAKLGL-LPSPF--FAPPQSLIDVVHEDWQRLGLS------TAYSL 162
           L  +   L +W+ F++     LP P   F   ++   +++    R GL       T  SL
Sbjct: 31  LAGILGFLIIWQIFSSSGATRLPGPLSLFTEERTRELLLYPFLDRGGLDKGLFWQTIASL 90

Query: 163 RLLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFFAPSSYSA 222
             +A GF + A++G   G+ VG +R     + PL +FL  +   A +P+A      +  A
Sbjct: 91  TRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALVAFQQNQPA 150

Query: 223 AVFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALPQVFVGLF 282
           A+F++ +   +P+ + T  GV  + + Y +VAR L  S+   +++V +PAALP +F GL 
Sbjct: 151 AIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAALPYIFTGLR 210

Query: 283 MGLGASFSVLITAE-MMGVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGLITLLFKV 341
           + +G S+  +I AE +M    G+G+++     W AY   Y +  ++AV+  G + LL   
Sbjct: 211 IAIGLSWLAIIAAEIVMSGIVGIGFFI-----WDAYQQNYVSDIILAVIYIGAVGLLL-- 263

Query: 342 RDRVLSW 348
            DR ++W
Sbjct: 264 -DRFVAW 269