Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 279 a.a., nitrate transport permease from Synechococcus elongatus PCC 7942

 Score =  113 bits (282), Expect = 7e-30
 Identities = 69/256 (26%), Positives = 133/256 (51%), Gaps = 20/256 (7%)

Query: 105 LRPAGQWLVALAVVLALWETFTAKLGL--LPSPFFAPPQSLIDVVHEDW-------QRLG 155
           L+P   ++V L + LA+W+  +A LG   LP P      + +  + E +       + LG
Sbjct: 22  LKPFLPYVVCLPIFLAIWQVISAILGQDRLPGPINVVANTWMPYIVEPFFDNGGTSKGLG 81

Query: 156 LSTAYSLRLLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFF 215
           L    SL+ +A G++L A  G   G  +G S+  G  + P+++ L  VP  A  P++   
Sbjct: 82  LQILISLQRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFPISLMV 141

Query: 216 APSSYSAAVFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALP 275
              + ++A+F++ +   +P+ + T  G+  +   Y +VAR L  S++  +L + IP+ +P
Sbjct: 142 FQDANTSAIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNILIPSTVP 201

Query: 276 QVFVGLFMGLGASFSVLITAEMMGVKAGLGWYLQWAQGWAAY---ANMYAALFVMAVLCS 332
            VF GL + +G ++  ++ AEM+    G+G+++     W AY    +  ++  ++A+   
Sbjct: 202 YVFAGLRIAVGLAWLAIVAAEMLKADGGIGYFI-----WDAYNAGGDGSSSQIILAIFYV 256

Query: 333 GLITLLFKVRDRVLSW 348
           GL+ L     DR+++W
Sbjct: 257 GLVGLSL---DRLVAW 269