Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 51/195 (26%), Positives = 98/195 (50%), Gaps = 1/195 (0%)

Query: 157 STAYSLRLLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFFA 216
           +T  S++ +  GF +        G+ +G+  +        +  L P+P  A +PLA  + 
Sbjct: 56  NTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWF 115

Query: 217 PSSYSAAVFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALPQ 276
               S+  F++ +  FFP+ + T SGV SV     + A+TLG S + ++  V +PA+ P 
Sbjct: 116 GIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPD 175

Query: 277 VFVGLFMGLGASFSVLITAEMM-GVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGLI 335
           +  GL +G G ++  ++ AEM+ G  AGLG+ + +A   +    + A++ ++ ++   L 
Sbjct: 176 ILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILD 235

Query: 336 TLLFKVRDRVLSWQK 350
             L  +  +   W+K
Sbjct: 236 KGLRYIEKKYFCWKK 250