Pairwise Alignments

Query, 233 a.a., DNA recombination and repair protein RecF from Variovorax sp. SCN45

Subject, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (283), Expect = 4e-30
 Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 9/236 (3%)

Query: 1   MHVTRLDARGLRRFADVSLLPAPGINLITGENGAGKTSLLEALHLMAYGRSFRGRVRDGL 60
           M ++RL  +  R      +  + G N + G NG+GKTS+LEA++L+ +GRSF+  +   +
Sbjct: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60

Query: 61  IRAGDPALEVFVEWQEARR----DQRRKAGLRHSGHDWAG--RLDGASVSQLGELCAALA 114
           I+  +   E+FV  +        DQ       +   D +   ++ G +  +L +L   L 
Sbjct: 61  IQ--NECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILP 118

Query: 115 VVSFEPGSHALITGPGEIRRRYLDWGLFHVEPDFTPLWRRYTRALKQRNALLKARARDGQ 174
           +    P    L+T   + RR ++DWG+FH EP F   W R+ R  KQRNALLK+     +
Sbjct: 119 LQLIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRE 178

Query: 175 LDAWDRELSDAGEPLSRRRQQYLDELQPRFAAFAAELAPGLGAIRLDYVPGWRRDE 230
           L  WD+EL+   E + + R+ Y+++L+           P    I L Y  GW +D+
Sbjct: 179 LSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFD-IDLKYYRGWEKDQ 233