Pairwise Alignments

Query, 632 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Variovorax sp. SCN45

Subject, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

 Score =  307 bits (786), Expect = 9e-88
 Identities = 208/571 (36%), Positives = 308/571 (53%), Gaps = 51/571 (8%)

Query: 59  EMLVRMGVVSHGQLQTALVRKMGYPLVNLNLFPAAADALRKVGHGVARRLQVMPLMLHQG 118
           E L+ + +    +L   L    G P  +L+ +  A    +     +  R   +P+     
Sbjct: 36  EALLELSIFHAQELTEQLSHIFGLPETDLSRYDYANLCQQLGLRELITRYDALPIAKQGN 95

Query: 119 RLVVALDDPSSRHSALEEIEFIAQMKVTPVVGQCLDLDSVLGAAYEKIGEPSIGIFSTNV 178
            L++A+ DP+    A EE  F   ++V   +     L + +   Y   G    G  +   
Sbjct: 96  LLLLAVSDPTLLQ-AEEEFRFATGLQVELALADHRALQAAIRRLY---GRSIQGAANQGK 151

Query: 179 DPGRPLEFDLAGTSE-LLQTLEKEGPASAPPAEAPIEQSDNSLVRMINSMILEAHREGAS 237
           +  +    +L   S+  LQ++E             + Q D+ + R IN ++L+A R+GAS
Sbjct: 152 EISQDELANLVKVSDDELQSIED------------LSQDDSPVSRFINQVLLDAVRKGAS 199

Query: 238 DIHIESYPGQEKTRIRFRRDGLLYTYLELPPSYRNAIVARVKIMCDLDISEKRNPQDGKI 297
           DIH E Y  Q   RIR R DG+L    +        + AR+KI+  LDI+E+R PQDG+I
Sbjct: 200 DIHFEPYENQY--RIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRI 257

Query: 298 NFAKYSPQHRIELRVATIPTNNGLEDVVMRILASSKP-IPMSELGLSPNNLAQLTKAVER 356
              + S    I++RV+T+PT  G E +V+R+L SS   + + +LG +P        A++R
Sbjct: 258 KL-RLSRDTAIDMRVSTLPTLWG-EKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKR 315

Query: 357 PYGMVLCVGPTGSGKTTTLHSALMQINTPERKIWTAEDPVEITQPGLRQVQINPRIDWTF 416
           P GM+L  GPTGSGKT +L++ L  +NT +  I TAEDPVEI   G+ QVQ+ P+I + F
Sbjct: 316 PQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGF 375

Query: 417 AKALRAFVRADPDVIMVGEIRDEETAKTAIEASLTGHLVLSTLHTNSAPETVTRLLDMGM 476
           A+ALR+F+R DPDV+MVGEIRD ETA+ A++A+ TGHLVLSTLHTNSA ETV RL +MG+
Sbjct: 376 AEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGV 435

Query: 477 DPFNFADSLLAVLAQRLVRRLCSRCTSSSPASSERIEELLDDYLHAFGTREDDAGRQRNA 536
           +PFN A SL  ++AQRL RRLC  C  +   S+     LL     AF         Q N 
Sbjct: 436 EPFNLASSLSLIIAQRLARRLCKHCKIAVRPSA-----LLQSQF-AF---------QPNE 480

Query: 537 VRDVWLRRYGREGRLHAYTSVGCKHCGGTGFKGRVGIHELMVMSKTLRRLVQTGARAEEL 596
           +             L+   + GC  C G G+ GRVGI+E+M  +  L   +   A   ++
Sbjct: 481 I-------------LYEANAAGCNECTG-GYSGRVGIYEVMAFNTELAEAIMQRASIHQI 526

Query: 597 QLAALQEGMRTLRQDGIEKVLAGHTTVEEVR 627
           +  A   GM+TL++ G+EK+  G T+  E++
Sbjct: 527 ERLAKANGMQTLQESGLEKLREGITSFAELQ 557