Pairwise Alignments

Query, 632 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Variovorax sp. SCN45

Subject, 575 a.a., MSHA biogenesis protein MshE from Vibrio cholerae E7946 ATCC 55056

 Score =  296 bits (758), Expect = 2e-84
 Identities = 200/606 (33%), Positives = 319/606 (52%), Gaps = 61/606 (10%)

Query: 26  RIGEALVSLGMVSDEQLREGLVRQRLEPQVPLGEMLVRMGVVSHGQLQTALVRKMGYPLV 85
           R+G+ LV  G+VS+ QL + L  Q+   +  LG+ L+ +G +S  QL   L +++  P++
Sbjct: 9   RLGDLLVEEGIVSEAQLEQALNAQKNTGR-RLGDTLISLGFLSETQLLNFLAQQLSLPVI 67

Query: 86  NLNLFPAAADALRKVGHGVARRLQVMPLMLHQGRLVVALDDPSSRHSALEEIEFIAQMKV 145
           +L+      DA+  +    ARRL+ + +      L +A+ DP+   +    +  +     
Sbjct: 68  DLSRAHVDIDAVPLLPEVHARRLRALVIGRSGDTLRIAMSDPADLFAQEALLNQLPDYGF 127

Query: 146 TPVVGQCLDLDSVLGAAYEKIGEPSIGIFSTNVDPGRPLEFDLAGTSELLQTLEKEGPAS 205
             V+     L       Y +  E                   +   +E L    K   + 
Sbjct: 128 EFVIAPEKQLVDGFDRYYRRTKE-------------------IVSFAEQLHAEHKTNDSF 168

Query: 206 APPAEAPIEQSDN---SLVRMINSMILEAHREGASDIHIESYPGQEKTRIRFRRDGLLYT 262
               +  I  SD+   ++V++INS+  +A + GASDIHIE  P     R+R R DG+L+ 
Sbjct: 169 ----DFEITDSDSDEVTVVKLINSLFEDAIQVGASDIHIE--PDANVLRLRQRIDGVLHE 222

Query: 263 YLELPPSYRNAIVARVKIMCDLDISEKRNPQDGKINFAKYSPQHRIELRVATIPTNNGLE 322
            L    +  +A+V R+K+M +LDISEKR PQDG+ N         +++R++T+P  +G E
Sbjct: 223 TLLHEVNIASALVLRLKLMANLDISEKRLPQDGRFNIRVKGQS--VDIRMSTMPIQHG-E 279

Query: 323 DVVMRILASSKPI-PMSELGLSPNNLAQLTKAVERPYGMVLCVGPTGSGKTTTLHSALMQ 381
            VVMR+L  S  +  + E G+ P+ L +L   ++RP+GM+L  GPTGSGKTTTL+ AL +
Sbjct: 280 SVVMRLLNQSAGVRKLEESGIPPHLLLRLRHQLKRPHGMILVTGPTGSGKTTTLYGALNE 339

Query: 382 INTPERKIWTAEDPVEITQPGLRQVQINPRIDWTFAKALRAFVRADPDVIMVGEIRDEET 441
           +NT  +KI TAEDPVE     + QVQ+NP+I+  F+  LR F+R DPD+I+VGE+RD+ET
Sbjct: 340 LNTSGKKIITAEDPVEYRISRINQVQVNPKINLDFSTLLRTFLRQDPDIILVGEMRDQET 399

Query: 442 AKTAIEASLTGHLVLSTLHTNSAPETVTRLLDMGMDPFNFADSLLAVLAQRLVRRLCSRC 501
            +  + A+LTGHLVLSTLHTN A ++  RL+DMG   +  A ++ AV+AQRLVR++C  C
Sbjct: 400 VEIGLRAALTGHLVLSTLHTNDAVDSALRLIDMGAPGYLVASAVRAVVAQRLVRKVCPDC 459

Query: 502 TSSSPASSERIEELLDDYLHAFGTREDDAGRQRNAVRDVWL-RRYGREGRLHAYTSVGCK 560
           +                         D+A RQ       WL  R+  +         GC+
Sbjct: 460 SGHDEV--------------------DEARRQ-------WLVTRFPNQAAAKFTRGRGCQ 492

Query: 561 HCGGTGFKGRVGIHELMVMSKTLRRLVQTGARAEELQLAALQEGMRTLRQDGIEKVLAGH 620
           +C  TG++GR+G+ E++ + + +   ++        + A      + L    +E  L G 
Sbjct: 493 NCNLTGYRGRIGVFEMLELDQPMMDCLRANDAVAFSKAARSNTDYKPLLASAMELALQGI 552

Query: 621 TTVEEV 626
            +++EV
Sbjct: 553 VSLDEV 558