Pairwise Alignments

Query, 245 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 314 a.a., multidrug resistance efflux transporter family protein from Methanococcus maripaludis S2

 Score =  119 bits (298), Expect = 7e-32
 Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 9/149 (6%)

Query: 2   AVLIALASALFFTCTYVLNRAAASSGGHWAWTASLRYLFTLPMLLLAMPLQGGIAPVWRA 61
           ++++ + S+LFF  T+VLNR     GG W ++ASLRY+FTLP LL+ +  +  I  V   
Sbjct: 3   SIILGILSSLFFASTFVLNRQMDLFGGDWIFSASLRYIFTLPFLLIILYGKNNIKKVIFE 62

Query: 62  IRAHPGPWLAWSAIGFGLFYLCLSYAAASGPSWLIAATFQLTVIAGMLCAPFLY------ 115
           I+ +   W  WS +GF LFY  L++A   GPSWLIA T+Q+T+IAG+L  P  Y      
Sbjct: 63  IKNNFKEWFIWSNVGFVLFYAPLTFAGNYGPSWLIAGTWQITIIAGILVTPLFYSMIENN 122

Query: 116 ---RDERARVPLPALLVGALIVAGVLLMQ 141
                 R ++P  +L +  +I+ G+LLMQ
Sbjct: 123 GNLEKVRNKIPKKSLFISLIILFGILLMQ 151