Pairwise Alignments

Query, 425 a.a., Transcriptional regulator LigR, LysR family from Variovorax sp. SCN45

Subject, 340 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (313), Expect = 3e-33
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 2/274 (0%)

Query: 125 RRLAVVASLAQKRNMPAVAREFGITQPAISSALKDLESGLGVALFTRTARGLSPTPAGEI 184
           + L +V SLA+ RNM   A    +TQPAIS  L+DLE  LG  LF R  R L  T  GE 
Sbjct: 30  KHLVLVNSLAKTRNMHTTAEHMNVTQPAISKLLRDLEVLLGFPLFERQTRSLVLTELGEF 89

Query: 185 VAFYFKRVLSELRHIGPDIAASEGSLQGSVTVGALPLGRTQILPLAIASLLARHPQLHVS 244
           VA Y +  L +       +        G + VG +    + +LP AIAS+    P L + 
Sbjct: 90  VARYARITLEDTESFVDQVNKLRKGGHGHLKVGTIFAATSVVLPEAIASIKRERPLLSIE 149

Query: 245 TVESPYDALAASLRSGDIDFILGALRNNAGEVKDLQQQALFEDRISVIARAGHPLARAER 304
            +E   + L   L    +D I+    +   + +  +  +L  +   ++A + HPL R E 
Sbjct: 150 VIEQTSNHLLEMLEQKKLDLIIARFTDE--DCQPFEFTSLGPEPFCLVANSTHPLCRLEE 207

Query: 305 IDFRMLREARWTLSRQGSPSRELLERFFSNARQAPPLPAVETGDLAVLRGLLLESDMLTA 364
           +    L E  W +    +P R+ +ER F   + APP   VET  +     LL    ML  
Sbjct: 208 VPTEALSEWPWVMYPFNTPIRQRMERAFRTFKIAPPTNTVETISMQTFLQLLQSGPMLAM 267

Query: 365 ISAHQLRYEIRDGSLVVLDFPLEETRREIGLTQR 398
           +    ++ ++++G L +L+ P +   ++ G+  R
Sbjct: 268 LPESMVQSQLQNGQLQILNTPFKVESQDYGVITR 301



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)

Query: 16  SVALGINLRHLRAFSAVAAAGSVAAAADALYRVASAVTRSVLDLEAALGRPLFDRRARGM 75
           SV+  + ++HL   +++A   ++   A+ +     A+++ + DLE  LG PLF+R+ R +
Sbjct: 22  SVSRWLKIKHLVLVNSLAKTRNMHTTAEHMNVTQPAISKLLRDLEVLLGFPLFERQTRSL 81

Query: 76  ALNAYGELVLVRALRIEREFEEARTQLV--ARGGMDGGADVHSLF--TSILNGRRLAVVA 131
            L   GE V  R  RI  E  E+    V   R G  G   V ++F  TS++    +A + 
Sbjct: 82  VLTELGEFV-ARYARITLEDTESFVDQVNKLRKGGHGHLKVGTIFAATSVVLPEAIASI- 139

Query: 132 SLAQKRNMPAVARE 145
               KR  P ++ E
Sbjct: 140 ----KRERPLLSIE 149