Pairwise Alignments

Query, 282 a.a., Transposase and inactivated derivatives, IS30 family from Variovorax sp. SCN45

Subject, 333 a.a., TRm24 transposase from Sinorhizobium meliloti 1021

 Score =  144 bits (364), Expect = 2e-39
 Identities = 97/257 (37%), Positives = 136/257 (52%), Gaps = 26/257 (10%)

Query: 18  WSPEQIANRLQVDFPDDQSMRISHEAIYQALYIQGRGALKRELVSYLRMGRALRVPRARA 77
           WSPEQIA RL  D     ++R+  E IY+ +Y +   AL  EL  +L  GR  R PR R+
Sbjct: 97  WSPEQIAGRLLAD--GVSAVRVCTETIYRFIYSKEDYAL--ELYQHLPEGRRKRRPR-RS 151

Query: 78  QATAWAHVSEEVMISSRPAEAEDRAVPGHWEGDLII---GLDRSAIGTLVERSSRFTMLV 134
           +      +  +  IS RP    DR+  GHWEGDL+I    L  + + +LVER SR+T+++
Sbjct: 152 RKPRDGSIPLDCRISQRPDFIADRSQFGHWEGDLLIFRRDLGEANVTSLVERKSRYTVMI 211

Query: 135 HLPREAGYRLTPRTKNGPALSGYGAVTMANALKRTVATLPAELWQSLTWDRGKELSDHAR 194
                         KNG   S      + + +    + LPA   QS T+DRG E      
Sbjct: 212 --------------KNGSRHSR----PLIDKIIDAFSPLPAFARQSFTFDRGTEFRGFKA 253

Query: 195 FSIESGVRVFFADPRSPWQRGTNENTNGLLRQYFPKGTDLSRWSEQEIQAVARTLNNRPR 254
                G R +F DP SPWQ+G  ENTN  +R++ P  TDLS  S+ ++ A+A  LN+ PR
Sbjct: 254 LEDGLGARSWFCDPNSPWQKGAVENTNKRIRRFVPSDTDLSAVSQPQLVALAHHLNSLPR 313

Query: 255 KTLGWKTPAETLNQYLK 271
           K LG++TPAE    +L+
Sbjct: 314 KCLGYRTPAEVFMAHLR 330