Pairwise Alignments

Query, 423 a.a., Polyketide synthase modules and related proteins from Variovorax sp. SCN45

Subject, 2624 a.a., beta-ketoacyl synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  146 bits (369), Expect = 7e-39
 Identities = 100/343 (29%), Positives = 155/343 (45%), Gaps = 39/343 (11%)

Query: 114 VAIVGLAGRYPQAPTLEAFWDNLRNGRDCIEPIPAERPELAARFRFKPGEPARAHSYGQW 173
           +AIVG+A  +  +  L  FWD + +  D I  +P     +   +     +  +  SY + 
Sbjct: 29  IAIVGMASIFANSRYLNKFWDLICDKIDAITDVPESHWSIDDYYDADKSKADK--SYCKR 86

Query: 174 GGFLRDVDRFDPLFFNISPKEAELIDPAERLFLETAFDAVEDAGYTPDTLAGGEHRVGVY 233
           GGF+ +VD F+P+ F + P   EL D ++ L L  A + ++DA    D       R+G+ 
Sbjct: 87  GGFMPEVD-FNPMEFGLPPNILELTDSSQLLSLVVAKEVLQDANLPDDY---DRDRIGIT 142

Query: 234 VGTMWGEYQLHGVTRAR---------------------------------EDWLTPHSFY 260
           +G   G+   H +                                     E+   P S  
Sbjct: 143 LGIGGGQKLSHSLNARLQYPVLKKVFKSSGLSDEDSELLIKKFQDQYVHWEENSFPGSLG 202

Query: 261 WAIANRVSYQFDLSGPSMTVDTACSSSLTAIQLAAEDVRKGAVEMAIAGGVNVIAHRNKY 320
             IA R++ +FDL G +  VD AC+ SL A+++A  ++ +G  +M I GGV        Y
Sbjct: 203 NVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMALTELTEGRSDMMITGGVCTDNSPYMY 262

Query: 321 LQLSAAQFLSSDGRCRAFGEGGDGYVPGEGVGAVVLKSLAKARRDGDHIYAVVRGSAINH 380
           +  S     +++ + + F     G + GEG+G V LK L  A RDGD IYAV++G   + 
Sbjct: 263 MSFSKTPAFTTNEQIQPFDIDSKGMMIGEGIGMVALKRLDDAERDGDRIYAVIKGVGASS 322

Query: 381 GGNAAGFTVPNPKRQALLIREALDSAGVDPRAISYVEAHGTGT 423
            G       P P+ QA  +  A D AG  P  +  +EAHGTGT
Sbjct: 323 DGKFKSIYAPRPEGQAKALERAYDDAGFAPHTVGLIEAHGTGT 365



 Score = 30.0 bits (66), Expect = 9e-04
 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 17/82 (20%)

Query: 40   FHEHHADAV----------------AGALAAAAPAAPVVAAPSPLAATPLAAVPPATPAL 83
            FH+H A  +                A AL    PA  V A     A   +A   P  PA 
Sbjct: 1112 FHQHQAQTLKSHAEFMQLQTSSSQAALALLGQKPAPQVQAPIQTAAPVAVAVATPVAPAQ 1171

Query: 84   VPLRARPMTAQRSALAAPVDEP 105
             P+  + + A+  A   PV EP
Sbjct: 1172 APV-VQALAAEPKATVVPVSEP 1192