Pairwise Alignments

Query, 441 a.a., Transposase from Variovorax sp. SCN45

Subject, 412 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 46/276 (16%)

Query: 64  MVKVLIYGYATGTFSSRKLAAKLHEDVALRVLAAENYPAHRTLSDFRALHLQELAALFVQ 123
           M+K+ IYGY     SSR+L  +   +V L  L     P  +T+++FR  + + +  +  Q
Sbjct: 1   MLKIYIYGYLNRIQSSRRLEREAQRNVELMWLTGRLMPDFKTIANFRKDNAKAIRGVCRQ 60

Query: 124 VVRLARECGLVKLGTVAVDGTKLKANASRHKAMSYDRMVKAEGELKAQIDGLLNRARAAD 183
            V L ++ GL     VA+DG+K KA   R +  +  ++ +   E+++ I   L   +A D
Sbjct: 61  FVVLCQQLGLFSEHFVAIDGSKFKAVNHRDRNFTSAKLKRRMQEIESSIARYL---KALD 117

Query: 184 DLEKNEPDLDVP-----GEIKRREDRLKAITEAKLRLEQRQREADAARGRSADDERKPRD 238
           + ++ EP    P      +I + ++++K + E +++LE                      
Sbjct: 118 EADREEPTSSGPKGGLEEKIAKLKEQMKVLQEIEIQLE---------------------- 155

Query: 239 KDGKPKGGRYKRDFGVPKDSAQESFTDTDSRIMKRSGGGYDYGYNAHTAVDESAQLVVAA 298
                                Q S TD D+R M  + G    GYN  TAVD    L+VA 
Sbjct: 156 ----------------ASPDKQISLTDPDARSMMMTSGNGIVGYNVQTAVDTKHHLIVAH 199

Query: 299 ELSNNAADSDRLPVLLAAVKANLGEDARQVLADAGF 334
           E++N   D D+L  +    +  +  ++  V+AD G+
Sbjct: 200 EVTNVGHDRDQLSSMAQQAREAMQIESLSVVADRGY 235