Pairwise Alignments

Query, 516 a.a., Mobile element protein from Variovorax sp. SCN45

Subject, 530 a.a., TRm23a transposase from Sinorhizobium meliloti 1021

 Score =  352 bits (902), Expect = e-101
 Identities = 191/437 (43%), Positives = 258/437 (59%), Gaps = 12/437 (2%)

Query: 1   MPTNRITMRRIRETLRLHLQADLSYNEIGRALKISKSAAGKYVSLARAAGIDWAVAQTLT 60
           MP  R+ MRR+RE LR   +  L +  I   +  + S   + +  A  A + W +   ++
Sbjct: 1   MPAERLEMRRVREILRYRFEQGLGHKSIAVRVGAAPSTVRETLRRAAIAELSWPLGDDVS 60

Query: 61  DEELESRLYRPALPRSSHQLAP--DFAIVHQELKRAGVTLQLLWEEYVRSLAGAGQQAYK 118
           D  LE+ LY+ A  ++ H+ +P  D+A VH+ELKR  +TLQ+LW+EY+          Y+
Sbjct: 61  DAVLEAALYKAAGTKTGHRRSPEPDWAQVHRELKRKHMTLQILWDEYISRYP----DGYR 116

Query: 119 YTSFCVKYRAWALGLKRSMRQTHIAGEKLFVDYAGQTVPLV-DAATGEITAAQIFVAALG 177
           Y+ FC  YR WA+ L  +MRQ H AG+KLFVDYAG TV +V D  +G+   A +FVA LG
Sbjct: 117 YSRFCDLYRGWAMKLPVTMRQDHAAGDKLFVDYAGDTVTVVVDRLSGKTRQAHLFVAVLG 176

Query: 178 ASNYTYACATARQTTADWIGAQVRALEFFGGVPRLIVPDQARALIKSPDRYDPEPNRLYD 237
           AS+ +YA A   +T  DWI   + ALE+FGG P L+VPD A+  I     +DP+ NR Y 
Sbjct: 177 ASSLSYAQARWSETLPDWIECHILALEYFGGAPALLVPDNAKVAIIKACHFDPQVNRTYC 236

Query: 238 EFATHYGCALLAARPAHPRDKPKVENAVLVVERWILARLRNRRFFSLGELNRAIAALLVD 297
             A HYG A+L  RP  PRDK KVE AV +VERW+L RLR+R F+SL E+N AI  LL D
Sbjct: 237 GMAAHYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGQLLHD 296

Query: 298 LN-QRPFKKLPGCRRSAFEMLDAPALRPLPAERFEACLWKSAKVNIDYHVEFDGHYYSVP 356
           LN +R  +++   RR  FE LD PALRPLP ER+    W+  +  +DYHVE + HYYSVP
Sbjct: 297 LNDKRVLRRVGATRRQLFEELDRPALRPLPVERYIFAEWRIRRAGLDYHVEIERHYYSVP 356

Query: 357 HALVRTTVELRVTASLVECFAANQRVACHALSHRKGAHTTTPEHMP----ASHRAHLEWT 412
           +   R  VE R+TA+ +E F   +R+A H  S   G HT +P   P    A     L   
Sbjct: 357 YRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTRSPIICPLRIAALPTGRLNGF 416

Query: 413 PQKLIDWGRRIGVSAAA 429
             K + WGR +   A+A
Sbjct: 417 NAKPLRWGRMLRCCASA 433