Pairwise Alignments

Query, 227 a.a., Integrase/recombinase, RitA from Variovorax sp. SCN45

Subject, 409 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

 Score =  190 bits (483), Expect = 3e-53
 Identities = 96/221 (43%), Positives = 143/221 (64%)

Query: 4   SLRAFLRYLHHTGLNPHALAGCVPSIRRWNLVGLPTYLSAAQVQKVLDGCDQASAVGRRD 63
           +LR++LR+L   GL    L   +P + +W L  LP YL+AA V++V+  CDQ +    RD
Sbjct: 185 ALRSYLRFLAGVGLCRPNLDHAIPPVLQWRLSSLPRYLAAADVERVIASCDQLTRGRLRD 244

Query: 64  FAILMMLSKIGLRADEVATLTLDDIDWRAGDMLVRAKGRQRARMPIALDVGAAIVAYLQE 123
            AIL++L+++GLRA +VA L L DI+W +G + +  K R++ R+P+  DVG A++AY+++
Sbjct: 245 RAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSGKARRQVRLPLPQDVGDALLAYIEQ 304

Query: 124 GRPKSSCRQLFLRSLAPHTGFASASAITMIAKTALERAGIQGYAHQGAHIFRHSLATELL 183
            RP+     +FL  +AP+  FA +S ++ I   AL+RAGI      GA + RHS AT +L
Sbjct: 305 ERPRMHQEAVFLTMIAPYRSFAQSSHVSTIVALALKRAGISDPPSTGACLLRHSAATSML 364

Query: 184 RAGATLSEIGHLLRHKSHDTTRIYAKVDIEALRTLSLPWPG 224
           R+GATL  +G +LRH+S D T  YAKVD   L  ++ PWPG
Sbjct: 365 RSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQVAQPWPG 405