Pairwise Alignments

Query, 227 a.a., Integrase/recombinase, RitA from Variovorax sp. SCN45

Subject, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

 Score = 72.8 bits (177), Expect = 8e-18
 Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 30/224 (13%)

Query: 4   SLRAFLRYLHHT-------GLNPHALAGCVPSIRRWNLVGLPTYLSAAQVQKVLDGCDQA 56
           ++++F RYL H         L  HA+   +  I       L   LS  +VQ +L+  D+ 
Sbjct: 86  AVKSFFRYLEHRVPAVLDQALRVHAMP--MKKIDE----ALVASLSRTEVQALLNAPDRR 139

Query: 57  SAVGRRDFAILMMLSKIGLRADEVATLTLDDIDWRA-GDMLVRAKGRQRARMPIALDVGA 115
           S  G RD A+L +    GLR  E+  LTLD  D R+   + +  KGR+   +P+  +  A
Sbjct: 140 SLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRERVLPLWQETAA 199

Query: 116 AIVAYLQEGRPKSSCRQLFLRS---LAPHTGF-----ASASAITMIAKTALERAGIQGYA 167
           AI A++   RPK+    LFL +   +   +GF       A+A   +A T   ++      
Sbjct: 200 AIRAWIAV-RPKNGDTALFLNNAGRMMTRSGFEYILEKHAAAAVSVAPTLATKS------ 252

Query: 168 HQGAHIFRHSLATELLRAGATLSEIGHLLRHKSHDTTRIYAKVD 211
               H+ RHS A  +L+A   + ++   L H S  +T IY + D
Sbjct: 253 -ISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRAD 295