Pairwise Alignments

Query, 342 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 307 a.a., Branched-chain amino acid ABC-type transport system, permease components from Pseudomonas stutzeri RCH2

 Score =  105 bits (261), Expect = 2e-27
 Identities = 74/246 (30%), Positives = 129/246 (52%), Gaps = 15/246 (6%)

Query: 98  VAFPAVAAVLILGFKPTSLAMQS--LATLVLIAPLGPLLYRVAYRPLADASVLMLLIVSV 155
           V F A+  + ++G     + M    +A +++ +  G  + RVAYRPL  ++ L+ LI ++
Sbjct: 52  VTFIAIVGLSMMGLDALPILMIGAFVAAMIVTSAYGYSIERVAYRPLRGSNRLIPLISAI 111

Query: 156 ALHGVLVGLGLFFFGAEGSRTSAFSE--------ARFDLGGIPVNGQSLVVVGVTLVLVI 207
            +   L  + L    A+ S+  A               + G+ ++   +++  VT V + 
Sbjct: 112 GMSIFLQNVVLL---AQDSKDKAIPNLMPGNLVIGESAMNGVVISYMQILIFVVTFVAMY 168

Query: 208 AMFWFFGRSMIGKALRATAINRVGARLSGIPTELSGDLSFALAAVIGAISGLLIA-PITT 266
            +  F  RS +G+A RA A +   A L GI T     L+F + A + A++ +LI+     
Sbjct: 169 GLTLFISRSRLGRACRACAEDLKMANLLGINTNSIIALTFVIGAALAAVAAVLISMQYGV 228

Query: 267 VYYDTGFLIGLKGFVAAIVGGLASYPLALAGALLVGLLEAF-SSFWASAYKEVLVFTLII 325
           +    GFL G+K F AA++GG+ S P A+ G L++G+ EAF +  +   YK+V+ F+L+I
Sbjct: 229 INPHIGFLAGIKAFTAAVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFSLLI 288

Query: 326 PVLLWR 331
            VLL+R
Sbjct: 289 LVLLFR 294