Pairwise Alignments

Query, 342 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 306 a.a., high-affinity branched-chain amino acid ABC ransporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 12/227 (5%)

Query: 113 PTSLAMQSLATLVLIAPLGPLLYRVAYRPLADASVLMLLIVSVALH-GVLVGLG-LFFFG 170
           P +LA+    T+VL A +G  L RVAYRPL       L +V  AL  G+++  G L   G
Sbjct: 70  PMALALTVPLTMVLTAGVGVTLERVAYRPLRRKGAHRLYVVITALMCGIMLENGNLALLG 129

Query: 171 AEGSRT-SAFSEARFDLGGIPVNGQSLVVVGVTLVLVIAMFWFF-GRSMIGKALRATAIN 228
           A          +  + +G + V    L+V+ VT  LV A+  F   R+ IG A+RA A +
Sbjct: 130 ASRKALPEMIDKVVYTIGTVSVTNLKLMVI-VTAFLVFALLQFIVTRTRIGMAMRAVAWD 188

Query: 229 RVGARLSGIPTELSGDLSFALAAVIGAISGLLIA---PITTVYYDTGFLIGLKGFVAAIV 285
           +    L GIP +     +F L +    ++GLL A   PI   Y   G ++G K F+AA+V
Sbjct: 189 KFALPLMGIPLDSIIVFTFVLGSGFAGLAGLLFAMSYPILDPY--MGAMVGWKAFIAAVV 246

Query: 286 GGLASYPLALAGALLVGLLEAF-SSFWASAYKEVLVFTLIIPVLLWR 331
           GG+     A  G  L+  +E   ++ + S ++++  F++++  ++W+
Sbjct: 247 GGIGDIRGAFIGGFLLAFIEIMVAAVFPSTFRDLFAFSILL-FIMWQ 292