Pairwise Alignments

Query, 342 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 291 a.a., ABC transporter permease from Burkholderia phytofirmans PsJN

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 89/329 (27%), Positives = 146/329 (44%), Gaps = 57/329 (17%)

Query: 3   LQIALLLGQDGIVNGAVYGLMALALVLVFSVTRVIFIPQGEFVAFGALSMAALQGGRAPS 62
           + I L L   GI  G +Y ++A    L F+ +  +   QG+ +  GAL            
Sbjct: 1   MAILLQLIYSGIALGMIYAVIAFGYQLTFATSGTLNFGQGDALMLGAL------------ 48

Query: 63  TLWLLLALAAIVLVVEAWRWKRGATVDWRSALTWCVAFPAVAAVLILGFKPTSLAMQSLA 122
                + L  + L V  W                 +  P V    +L             
Sbjct: 49  -----VGLTLVTLGVNYW-----------------LMIPLVCVFGLLQ------------ 74

Query: 123 TLVLIAPLGPLLYRVAYRP-LADASVLMLLIVSVALHGVLVGLGLFFFGAEGSR-TSAFS 180
                   G  + R+  RP +   S    ++ ++AL  +   +    +G +  R  S   
Sbjct: 75  --------GAFVERIGVRPAIRIKSEFGWIMSTIALGIIFKNVAENLWGRDDLRFPSPLP 126

Query: 181 EARFDLGGIPVNGQSLVVVGVTLVLVIAMFWFFGRSMIGKALRATAINRVGARLSGIPTE 240
           EA   + G  V    L+VVG  LV+++A+ +F  +++ GKA+ ATA +R  A L GI T 
Sbjct: 127 EAPLKVFGANVLPMELLVVGGALVMMLAVEFFNRKTIFGKAVVATANDRDAAALMGINTG 186

Query: 241 LSGDLSFALAAVIGAISGLLIAPITTVYYDTGFLIGLKGFVAAIVGGLASYPLALAGALL 300
           L    S+AL+++  A +G+LIAP+T      G ++GLK F  AI+GGL+S    + G ++
Sbjct: 187 LVITFSYALSSLTAAFAGVLIAPLTLTGATMGAVLGLKAFAVAIIGGLSSGLGIVVGGVI 246

Query: 301 VGLLEAFSSFWAS-AYKEVLVFTLIIPVL 328
           +G+ E  + F+ S  YK+V    L++ VL
Sbjct: 247 LGIAETTTGFYISTGYKDVPGLVLLLIVL 275