Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  384 bits (986), Expect = e-111
 Identities = 191/309 (61%), Positives = 236/309 (76%), Gaps = 6/309 (1%)

Query: 20  APAAVRRTEEPAAPAVKAVRAA------VDAKPVSSRHAALRAFLRNPAAVAGVVLLVCM 73
           APA   +   P  PA   ++A         A  +++   AL+ FL NP A+ G   L  +
Sbjct: 19  APATNEQATAPERPAWSNMKAPDARSQQTAAVAITNGRRALKVFLANPNALFGTAFLALV 78

Query: 74  LILALLAPLLYPGDPLDMVAPPLLWPGQDAAYPLGSDSLGRDVIAGIAHGARVSLAVGVV 133
           + +ALLAP+LYPGDPL MV  P LWPGQ  A+PLG+DSLGRDV+AGI HG+R+SL VG++
Sbjct: 79  IAVALLAPVLYPGDPLSMVGKPFLWPGQHPAFPLGTDSLGRDVLAGILHGSRISLFVGLM 138

Query: 134 AAVLSLVIGVLVGATAGYFGGRIDDVLVRITELFQTMPSFLFVIVVVAIGQPSVPVIVCA 193
           A  L L  GV+VGA AGYF G IDD+LVR+ E+FQT+PSF+ ++V+VAI QPS   +  A
Sbjct: 139 ATALGLTFGVVVGAIAGYFSGWIDDLLVRLIEIFQTLPSFVLLVVLVAIVQPSATTVTLA 198

Query: 194 IGLASWPVIARLVRAEFRALRETEFVLAARSQGFSHARIIFQEMLPNALPPVIVTTSVLV 253
           I + SWP +ARL RAEFRA+RE +FV+AARS GF H RII +E+LPNALPP+IVT+SV+V
Sbjct: 199 IAVISWPTVARLTRAEFRAIREKDFVMAARSLGFGHGRIIVREILPNALPPIIVTSSVMV 258

Query: 254 ASAILIESALSFLGMGDPNAVSWGSMIGQGRELLRTAWYLTALPGAAIVLTVLALNLVGD 313
           A+AIL+ESALSF+G+GDPN VSWGSMIG GREL+RTAWYLTALPG AIV TVLALNL+GD
Sbjct: 259 ATAILMESALSFMGLGDPNVVSWGSMIGTGRELVRTAWYLTALPGLAIVFTVLALNLIGD 318

Query: 314 GLNDAFNPR 322
           GLNDA NPR
Sbjct: 319 GLNDALNPR 327