Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  189 bits (481), Expect = 6e-53
 Identities = 106/296 (35%), Positives = 167/296 (56%), Gaps = 8/296 (2%)

Query: 37  AVRAAVDAKPVSSR--HAALRAFLRNPAAVAGVVLLVCMLILALLAPLLYPGDP-----L 89
           A  +A    PV +R     +     +  A  G+ L++ ++ LAL APL+ P DP     +
Sbjct: 3   ASASAASPTPVGTRVPRGRISELWHDKTAAIGLALILLIVFLALFAPLIAPYDPAAQSIM 62

Query: 90  DMVAPPLLWPGQDAAYPLGSDSLGRDVIAGIAHGARVSLAVGVVAAVLSLVIGVLVGATA 149
             + PP+        + LG+D+LGRDV++ I  GAR +L +G V  +L+  +G ++G  A
Sbjct: 63  ARLKPPVWMERGTWEHLLGTDNLGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIGLWA 122

Query: 150 GYFGGRIDDVLVRITELFQTMPSFLFVIVVVAIGQPSVPVIVCAIGLASWPVIARLVRAE 209
           G+ GGR D +L+R+ ++  + P  L +++VVA+  P V  +V  + + +W V ARLVR  
Sbjct: 123 GFMGGRTDSILMRLVDIQVSFPGILLILLVVAVLGPGVWTLVAVLSVTNWMVYARLVRGI 182

Query: 210 FRALRETEFVLAARSQGFSHARIIFQEMLPNALPPVIVTTSVLVASAILIESALSFLGMG 269
             + R+T +V AA   G   AR+IF+ +LPN + P++    +   + +L E+A+SFLG G
Sbjct: 183 VSSTRQTPYVEAAEVIGCRPARVIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFLGFG 242

Query: 270 -DPNAVSWGSMIGQGRELLRTAWYLTALPGAAIVLTVLALNLVGDGLNDAFNPRLR 324
             P A SWG  +  GR+ L  AW+L   PG AIV TVL++NL  + L    +P  R
Sbjct: 243 VQPPATSWGLDVASGRDYLFIAWWLVTFPGLAIVATVLSINLFANWLRVTTDPEER 298