Pairwise Alignments

Query, 327 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 315 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  211 bits (538), Expect = 1e-59
 Identities = 120/308 (38%), Positives = 174/308 (56%), Gaps = 6/308 (1%)

Query: 18  VPTVIGVILLNFILMQLIPGDAADVVAAESGSATAESMAQLRTHFGLDLPVIQQLFAYLN 77
           VP + G+ ++ F++M LIPGD A  +      AT E++ ++    GLD P++QQ   ++ 
Sbjct: 13  VPVLFGLSIIVFLVMGLIPGDTATAILGSY--ATPENVERINRDLGLDKPLVQQYAIWIG 70

Query: 78  NLAHFSLGISPRYNMPVVSLIGARLGNTLLLMVTALAFALAIGIAAGTVMATRVGRWQDR 137
           N+     G S   N PV+  +  R   TL+L   +L     IG+ AG V A R   W DR
Sbjct: 71  NVLQGDFGRSFALNRPVLDEVLERFQATLVLAGVSLVLCSVIGLLAGVVSAVRQFGWADR 130

Query: 138 TLSVLALLLYSTPGFWLGLMAIVLFSVHLGWLPTGGSESIGAGYTGWTHVVDVARHLVLP 197
            ++   L   STP FWLGL+ I LF+VH   LP  G  ++     G   + D+  HL+LP
Sbjct: 131 VITFFVLAGISTPSFWLGLLLIYLFAVHWRILPASGMYAV----YGRGDLKDLLLHLILP 186

Query: 198 ALAMAGFYIAIFSRLTRAAMLEVSRQDFVRTAEAKGLHPWTVNLRHILRNALIPVTTVAG 257
           A  +A     + +RLTR AMLEV RQD+VRTA AKGL    V   H  R AL+ V    G
Sbjct: 187 AATLAVVAAGVIARLTRGAMLEVLRQDYVRTARAKGLPERRVIYAHAFRAALVSVVPAIG 246

Query: 258 MHFGTLLGGAVVVETVFSWPGLGRLAFDSVAGRDYTVLLGVLLMSSLLVIVANMLVDLLH 317
           +  G +LGGAV VETVF WPG+G +   +++ RD  ++ G +L+ +   ++ N+L D++ 
Sbjct: 247 IQAGFVLGGAVYVETVFQWPGIGAMLVKAISTRDILLVQGGVLVVAASYVLFNLLADVVQ 306

Query: 318 AWLDPRIQ 325
           + LDPRI+
Sbjct: 307 SMLDPRIR 314